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grid [2018/01/25 17:22]
popel [Advanced usage] |
grid [2018/03/01 22:04]
kruza [Advanced usage] |
| This way your job is submitted to the Troja queue. The default is ''ms-all.q''. You can also use e.g. | This way your job is submitted to the Troja queue. The default is ''ms-all.q''. You can also use e.g. |
| ''-q '(troja*|ms*)''' to submit on any machine in those two queues (but **don't use ''-q '*'''** as this includes also [[:gpu|gpu.q]]), | ''-q '(troja*|ms*)''' to submit on any machine in those two queues (but **don't use ''-q '*'''** as this includes also [[:gpu|gpu.q]]), |
| ''-q '*@hector[14]''' to submit on hecor1 or hector4, | ''-q '*@hector[14]''' to submit on hector1 or hector4, |
| ''-q '[tm]*@!(hector*|iridium)''' to submit on any troja/ms machine except hectors and iridium. | ''-q '[tm]*@!(hector*|iridium)''' to submit on any troja/ms machine except hectors and iridium. |
| However, usually you should specify just the queue (troja-all.q vs. ms-all.q), not a particular machine, and instead use ''-l'' to specify the needed resources in a general way. | However, usually you should specify just the queue (troja-all.q vs. ms-all.q), not a particular machine, and instead use ''-l'' to specify the needed resources in a general way. |
| * ''-tc j'' run at most j jobs simultaneously | * ''-tc j'' run at most j jobs simultaneously |
| * ''-hold_jid_ad comma_separated_job_list'' array jobs that must finish before this job starts; task //i// of the current job depends only on task //i// of the specified jobs | * ''-hold_jid_ad comma_separated_job_list'' array jobs that must finish before this job starts; task //i// of the current job depends only on task //i// of the specified jobs |
| | |
| | === Delete many jobs at once === |
| | For deleting all your jobs use ''qdel \*''. For deleting array jobs (see above), you can use comma-separated ranges of task ids, e.g. ''qdel -t 1,10,50-100''. |
| | For deleting a range of (normal) job ids, you can use bash expansion (as an alternative to ''seq''), e.g. ''qdel {17979..18028}''. |
| |
| === Ssh to random sol === | === Ssh to random sol === |
| Ondřej Bojar suggests to add the following alias to your .bashrc (cf. [[#sshcwd]]): | Ondřej Bojar suggests to add the following alias to your .bashrc (cf. [[#sshcwd]]): |
| <code>alias cluster='comp=$(($RANDOM /4095 +1)); ssh -o "StrictHostKeyChecking no" sol$comp'</code> | <code>alias cluster='comp=$(($RANDOM /4095 +1)); ssh -o "StrictHostKeyChecking no" sol$comp'</code> |
| | |
| ===== Job monitoring ===== | ===== Job monitoring ===== |
| |
