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grid [2020/05/06 14:45]
ufal [Other] 		grid [2023/01/09 15:06] (current)
zeman [Advanced usage]
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 TODO: describe alternatives, e.g.: MetaCentrum / Cesnet cluster (all MFF students can use it), Amazon EC2, Microsoft Azure (some colleagues may have sometime free vouchers). TODO: describe alternatives, e.g.: MetaCentrum / Cesnet cluster (all MFF students can use it), Amazon EC2, Microsoft Azure (some colleagues may have sometime free vouchers).
  
 +**TODO: IN 2022 MOVING FROM SGE TO SLURM** (see [[slurm|slurm guidelines]]) -- **commands like ''qsub'' and ''qstat'' will stop working!**
 ===== List of Machines ===== ===== List of Machines =====
 Last update: 2017/06. All machines have Ubuntu 18.04. Last update: 2017/06. All machines have Ubuntu 18.04.
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 ^ Name                ^ CPU type and flags              ^ GHz ^cores ^RAM(GB)^ note ^ ^ Name                ^ CPU type and flags              ^ GHz ^cores ^RAM(GB)^ note ^
-| andromeda[1-13]     | AMD Opteron                     | 2.8 |    7 |   30  |      | 
-| lucifer[1-10]       | Intel(R) Xeon(R) CPU E5620      | 2.4 |   15 |  122  |      | 
 | hydra[1-4]          | AMD Opteron SSE4 AVX            | 2.6 |   15 |  122  |   AVX enabled   | | hydra[1-4]          | AMD Opteron SSE4 AVX            | 2.6 |   15 |  122  |   AVX enabled   |
 | orion[1-8]          | Intel(R) Xeon(R) CPU E5-2630 v4 | 2.2 |   39 |  122  |   AVX enabled   | | orion[1-8]          | Intel(R) Xeon(R) CPU E5-2630 v4 | 2.2 |   39 |  122  |   AVX enabled   |
-| cosmos              | Intel Xeon                      | 2.9 |    7 |  249  |      | 
 | belzebub            | Intel Xeon SSE4 AVX             | 2.9 |   31 |  249  |   AVX enabled   | | belzebub            | Intel Xeon SSE4 AVX             | 2.9 |   31 |  249  |   AVX enabled   |
 | iridium             | Intel Xeon SSE4                 | 1.9 |   15 |  501  |      | | iridium             | Intel Xeon SSE4                 | 1.9 |   15 |  501  |      |
- 
-Machines from old cluster (do not use!): 
- 
-^ Name                ^ CPU type and flags              ^ GHz ^cores ^RAM(GB)^ note ^ 
-| fireball[1-10]      | Intel Xeon           | 3.0 |    4 |   32 | removed | 
-| hyperion[1-9]       | Intel Xeon           | 3.0 |    4 |   32 | removed | 
-| tauri[1-10]         | Intel Xeon           | 3.0 |    4 |   32 | removed | 
-| twister[1,2]        | Intel Xeon SSE4      | 2.4 |    8 |   48 | moved to GPU cluster| 
  
 <html><!-- <html><!--
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 === Submit hosts / test machines === === Submit hosts / test machines ===
 ^ Name                ^ CPU type                        ^ GHz ^cores ^ RAM(GB) ^ note  ^ ^ Name                ^ CPU type                        ^ GHz ^cores ^ RAM(GB) ^ note  ^
-| sol[1-10]           | Intel(R) Xeon(R) CPU E5345      | 2.3 |    7 |   31    | you can ssh here and compute or submit jobs |+| sol[1-8]           | Intel(R) Xeon(R) CPU E5-2630 v3 | 2.4 |    7 |   28    | you can ssh here and compute or submit jobs |
 | lrc[12]             | Intel(R) Xeon(R) CPU E5-2630 v4 | 2.2 |    4 |    4    | you can submit jobs here or monitor job execution - NO COMPUTATION IS ALLOWED HERE !!! | | lrc[12]             | Intel(R) Xeon(R) CPU E5-2630 v4 | 2.2 |    4 |    4    | you can submit jobs here or monitor job execution - NO COMPUTATION IS ALLOWED HERE !!! |
  
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 ''qsub **-q** cpu-troja.q'' ''qsub **-q** cpu-troja.q''
-This way your job is submitted to the Troja queue. The default is ''cpu-ms.q''. You can also use e.g. +This way your job is submitted to the Troja queue. The default is ''cpu-*.q''. You can also use e.g. 
-''-q '(troja*|ms*)''' to submit on any machine in those two queues (but **don't use ''-q '*'''** as this includes also [[:gpu|gpu.q]]),+''-q '(cpu-t*|cpu-m*)''' to submit on any machine in those two queues (but **don't use ''-q '*'''** as this includes also [[:gpu|gpu.q]]),
 ''-q '*@hector[14]''' to submit on hector1 or hector4, ''-q '*@hector[14]''' to submit on hector1 or hector4,
-''-q '[tm]*@!(hector*|iridium)''' to submit on any troja/ms machine except hectors and iridium.+''-q 'cpu-*@!(hector*|iridium)''' to submit on any troja/ms machine except hectors and iridium.
 However, usually you should specify just the queue (cpu-troja.q vs. cpu-ms.q), not a particular machine, and instead use ''-l'' to specify the needed resources in a general way. However, usually you should specify just the queue (cpu-troja.q vs. cpu-ms.q), not a particular machine, and instead use ''-l'' to specify the needed resources in a general way.
  
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 You can change some properties of already submitted jobs (both waiting in the queue and running). Changeable properties are listed in ''man qsub''. You can change some properties of already submitted jobs (both waiting in the queue and running). Changeable properties are listed in ''man qsub''.
  
-''**man** qsub qstat qalter qhold queue_conf sge_types complex''+''[[https://gridscheduler.sourceforge.net/htmlman/htmlman1/qsub.html|man qsub]] qstat qalter qhold queue_conf sge_types complex''
 Find out all the gory details which are missing here. You'll have to do it one day anyway:-). Find out all the gory details which are missing here. You'll have to do it one day anyway:-).
  

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